PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR01G16270.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 127aa    MW: 13380.2 Da    PI: 9.9204
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR01G16270.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.81.1e-084674533
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLee 33
                     ++ +rk++NR++A+rsR+RK+++++eL+ 
  LPERR01G16270.1 46 RKRKRKESNRLSAQRSRARKQQQLDELAA 74
                     6789***********************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.8E-84475No hitNo description
PROSITE profilePS502178.7494475IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.14E-74676No hitNo description
CDDcd147021.63E-134775No hitNo description
PROSITE patternPS0003604964IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
MASPGVVYSV TTTPTSSAGS DQVFVAGAGD DAPRRPAAAP AVMEERKRKR KESNRLSAQR  60
SRARKQQQLD ELAAQWLHAA ASFAAAPPPP TMSTAAVFPG AGAGGFMMPA LYQPPLLDAT  120
TLQCNYY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14550RKRKRK
24551RKRKRKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1105261e-55AK110526.1 Oryza sativa Japonica Group cDNA clone:002-167-H10, full insert sequence.
GenBankAP0042331e-55AP004233.3 Oryza sativa Japonica Group genomic DNA, chromosome 1, BAC clone:OSJNBa0065J17.
GenBankAP0043611e-55AP004361.4 Oryza sativa Japonica Group genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24.
GenBankAP0149571e-55AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence.
GenBankCP0126091e-55CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence.
GenBankCT8418831e-55CT841883.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C106I19, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015641337.16e-33PREDICTED: ocs element-binding factor 1
TrEMBLA0A0D9V1T36e-88A0A0D9V1T3_9ORYZ; Uncharacterized protein
STRINGLOC_Os01g36220.12e-32(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP137572428